COMRAD - Cattle Comparative Radiation Hybrid Map

Marker Table for Chromosome 11

Framework
markers
Marker IDPrimer 1Primer 2Retention
Frequency
Gene Names
F2 BM2818 TTCTGTGGTTGAAGAGTGTTCC CAATGGCTAAGAGGTCCAGTG 0.213   
 BM304 CTGGTGTTCCTTTCATATCAACC GGCACGTACTAACCTGTAAAACC 0.213   
 BM6445 GTGTCTGTCAAAAGATGAATGG GACAACTGCTTCTCGTTGGG 0.223   
F1 BM716 AGTACTTGGCTTGCTTTGCTC TTAAATTTCCATCTCACCCTGG 0.161   
 BM7169 TGGTATGTAGTTACAGCAGCCC CCATTGAAACAGACATGAATGC 0.234   
 BM746 CTATCTGTTTCCCCAGCTTCC GCCCAGGTTAATGACAGAGC 0.255   
F1 BM827 GGGCTGGTCGTATGCTGAG GTTGGACTTGCTGAAGTGACC 0.266   
F3 BM9146 CTGCAGCACATTTCTTCACTG GATGTTCCAAAGAACTCCAAGG 0.223   
 BMS1048 GTTTGATACTATGTCCCTTTGTGTG GAGTAGCTGCCCCTGTTCTC 0.255   
 BMS1350 GTGGTAATCGGAAAATGCAA ACTGTTGGGAGAATCACATTTC 0.287   
 BMS1716 GTGGGTTGGAGAGGTACAAG AGAAATGGCCTTGAGAAAGAG 0.234   
F1 BMS1953 TGCTGTAGGAGAAAATAAAGCAG TTTGCTGAGAGGACTTTGAGA 0.202   
 BMS2325 TCCATCTTGCAGAAGTGTGC AGGGCCAGGAATGCTAGTG 0.255   
F1 BMS2621 TTCCCATATGCTAACGAGGG TTTTTGGAAGCTGGAGATGC 0.227   
 BMS460 TGCCCCATAGTGTAGTGCTC GCCAGCAGAGAATTGTAGCA 0.194   
 CSSM052 AAATGCACCGGCTAATATGAAAGG GTATATACTGTTGTTTTCTGGCAG 0.149   
F2 DIK23 ACCCCTGCTGCTCTGCCAA TGGCAGGCTACAGTCCACAA 0.237   
F3 DIK28 ACACAGAATAGGAGAGGAATC TATTGCTTGCAGAATCCCATG 0.237   
F1 HAUT30 ACGGTAGGAATATGAGGGTGT CCCAACCATCCCCACTTCTG 0.312   
 HELMTT43 ACAGAGGTGGGGTAGACTTTT GGTTACAGTCCATGAGTTTGCAAAG 0.344   
F1 HELMTT45 CACTCGGGTTTTAGTGAGTC CACAACTGAACGACTAACACTT 0.234   
 HUJV174 GTCTATAGTGCCAGAAGAGG CTGTGTCAATACAGCCTGTG 0.215   
 IDVGA3 GGATAGGTATAATTAAGTTTCTGGC AGGGACTTAGCACATACTCACAC 0.237   
F4 IDVGA63 AAGAAAGGGTCTCCTCTGTA GCTGTGAATACGGACAAGAATA 0.223   
F2 ILSTS049 CAATTTTCTTGTCTCTCCCC GCTGAATCTTGTCAAACAGG 0.237   
F3 ILSTS100 GCTGAACTAGGGTGTAAAGC GTTATGACTTCTCCTTGACC 0.245   
 INRA108 AGTCTGTGGGGTTCCAGAGTTG TTACAGTTAACTCACCCTCC 0.17   
 INRA111 TTGTCGGTGTGGAGAAGCACC GTTTCCCGGTAACCAATTCC 0.213   
F3 INRA115 GACTAACACAAAATGACTCGTG GGAGGGGGACTACTTCTCATGC 0.191   
 INRA131 GGTAAAATCCTGCAAAACACAG TGACTGTATAGACTGAAGCAAC 0.261   
 INRA177 CAGCAGTAGTCACCTAAAACC AAGGAAACTCCAAAACACCAGG 0.202   
 INRA32 AAACTGTATTCTCTAATAGCTAC GCAAGACATATCTCCATTCCTTT 0.255   
 INRABERN169 GCACAGAAAAATGAAGCAGAAG CAAAGCCTATGAGAGACAATGA 0.223   
F4 JAB7 GCGGAAGTACAGAGAGTTCTGTG GTAAGTGCTGACAGGAGGGACTG 0.226   
 LGB* TGTGCTCCACACCGACTACAAAAAG GCTCCCGGTATATGACCACCCTCT 0.237 lactoglobulin, beta 
 OarCP34 GCTGAACAATGTGATATGTTCAGG GGGACAATACTGTCTTAGATGCTGC 0.17   
 RM096 TCGCAAAAAGTTGGACAAGACT TTAGCAGGGTGCCTGACACTT 0.223   
F3 RM150 GAACAGTGGTTACCTGTCTGTC CTGCCTAACCTTCCTGGCGTC 0.161   
F2 TGLA327 TCTGAAGGCTAAATAACTTCTCTAT GCACAAAGACTCAGACATGACTG 0.213   
 TGLA340 CAGGCCTTCACCAACAGTTCACTGA GATTCCACAGTGCCAGACCCAAGCC 0.106   
F4 TGLA436 CTCCAAAGGTGTGAATTAAATTACC TGATTCCTTTTAAACAAGATTTTAAGA 0.172   
Markers below are Not included in the map
 BMS2208 TCTTGCTTTGTTAATGCCCC GCAGTAAGGCTTGTCTTTGAGG 0.17   
 BMS352 ACTCTGGAGAAGCCTTTGGT ATTTGAAAAGAGACATACAGACACA 0.287   
 BP38 CCAAATGATGGTTCAAGTTTG GCTCATGATAAAGGGAATTCAG 0.17   
 ETH9 GACACGGTCAGTGACCCACGGT GGAATGCAGAGTCTTAGCCACTGG 0.223   
 TGLA58 TTCTACTCTCCAGCCTCCTCC GTTGGCTCCAAGAGCAAGTC 0.191   
  • Back to the chromosome panel
  • Data from http://www.projects.roslin.ac.uk/comrad/introduction.html
  • Contact: Dr John Williams
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