COMRAD - Cattle Comparative Radiation Hybrid Map

Marker Table for Chromosome X

Framework
markers
Marker IDPrimer 1Primer 2Retention
Frequency
Gene Names
F2 AGLA257 AGCTAGATTAACACCAAAA AATTCCATGTATCAGTTGT 0.585   
F2 BL1098 CCACAACTTCCAGAAGCCTC CAGAAACCACCCAAACTAACC 0.468   
 BM2713 CTCCTAAGTCCAGGAAGCCC TGAATACCTGTTTCCAGCCC 0.5 
 BM4606 TCTATACTGACACAAGCCCAGG AAAGTCCTTCAGGCAGAAAAG 0.106   
F1 BM6017 TCTTCTGTTTTCCTCCATCCC GGAAACTAGCTTATGCTGTGGG 0.362   
 BM7144 AGGCCCACTGTTTCCTACCT GCCATACAACAATGTGAATTAGC 0.106   
F2 BM9208 TGCAGCATCACACGTTTACC TTCTGGCAGCATCTTTCTTG 0.436   
 BMC6021 AGGCCAAGTGAAGAGGTCAC TCTGCTCCAGCTTTCCAGTA 0.181   
 BMS1008 CCGATATGTATAGTGTTCCCCT CCTGGTCAAAAAATTAGAAGGA 0.484 
 BMS1616 CAGTGTGTATAGCATGATTCCG AGTTGGTCTGCATTCATACATTAA 0.511   
 BMS1820 CACAAAGAATCAGACATGATGG ACTGTGTACTGGAGTGGAAAGG 0.309   
 BMS2083 CAAACCTCTGGATCACTTAAGC CCAGAGAAACAGAATCAAAAGTG 0.165   
F2 BMS2152 AGTGGCCTCTAAGCAATATGAA TGTATTCACACCTCTGTGTCTGA 0.43   
F2 BMS2227 AAATTTGCTATTTCTCTAGACATGATT ATGGTTATTTTCATAATCAGAGGTATG 0.511   
 BMS2592 GAGCTGTTCCACATGCAGAT GATGGAGGAGGAATAAGACAGG 0.118   
 BMS2722 TAGAGCCCACGTGAAAAATG GCAGGCTTTCACAAATACACA 0.16  
 BMS397 GCCACAATACTACCACCGC AAATAAGCATTTTGAACAGAGACTG 0.181   
 BMS417 TGTTAGCATTATTCCCACATGC AGGGTGGTAAGCAGCAAATG 0.351   
 BMS500 GGGGAGCCAAGATATGGAAG CCATGTTGTCGAGCAATGAC 0.117   
 BMS513 TTCTTACATGACATCCTGGGA TGAATCTAGCATCAATGGTACTTT 0.181   
F1 BMS631 TTTCCACCCTCAGCTAAAGTG AAATGACAGGTGTCTTGGGC 0.333   
 BMS811 AAAGCTCTCATAAACCAGCACA CAAATTTAGGCCCCTGTAGC 0.638   
 BMS903 TGCTCAGAAATTGAAGGTGG AAGCTTCCTCATACCTCACTCC 0.457   
 BMS911 TGGCCAATCTCTGCTATAGG TTTCCCTGTATTTTCAGGTCC 0.213   
F2 BMS938 CATTTGTATTAGTCAGAGTCCTCCA CTATTGTAACTGTGTGCCAATTCC 0.585   
 BMS960 TGTAAATAGCTCCCCTCCTGC CTAGCAATTTGTTGTTCATGGC 0.415   
F1 ETH123 GTCAGACATGACTGAGTGAC CTGCTATAGAGGTATAGGAGG 0.277   
 HAUT37 TTACAATAGCAAGACTTACACTT TCTTCACTTTCTGCCATTAGG 0.202   
 HEL26(X?) GCTTCTCTAAACAGGTGCCTT AGGCTACAGTCCATGGGATT 0.467   
 HUJ121 GGCTGGTCTCCATGGGAAGC GGTGGGCTACAGTCCACGGG 0.426   
 HUMm2-21 ACCAAGGTTGAGAATGGTGC TCCATAGACAGAGAAGCCTGG 0.398   
 IDVGA82 ACAATGATGAGGGGCTCTG GGCAAACCATTCCAGTATTC 0.191   
 INRA030(X) ATGCAAATGTGCTACATCACCTAT CCCAACTCTCACATCCAGAT 0.362   
 R314 CAAAGTATACAGGTCCCTGTTCG GTCTCAATCAGGACCCAATGG 0.301   
 RM350 TGTGCCAGATGTGGTCCTAG AGTTCATGATTGTGCAGACCC 0.255   
 XBM111 TGAAAGGGGATGACTTACAACC AATCGCAAAGAGTGGGACAC 0.462   
 XBM16 AGGATAATTTGCTCTGTGCCC ATGGCAATATGAGGAGTTGC 0.234   
 XBM24 TTACCACTGAGCCACCTGG ATGATGCTTCTGTCAAGAGGTT 0.17   
F1 XBM411 AGTCACGAAAATGCCACATG GTTCAGGATTACCACCATAGCC 0.37   
 XBM521 CCTTCAGGTCTCAGCTCACC AGTGCTATGAAGAAGACCAGGG 0.5   
 XBM7 CTGTATTAGAGTTCCCTGGAGAAA GCCAACATGCCCTGTAGAAT 0.511   
 XBM701 TTCCCCTTGAAATCATCTGG TCCAAGTTACCAAAATTGACCC 0.446   
 XBM73 CGATGTCAGCAACAATCCC TTGGTGTGTGCTTCTGTTCTG 0.174   
 XBM84 TCAGGTGAATACTTTCCCACG TCCTTGTGTCCCTTTAGTTTTG 0.117   
Markers below are Not included in the map
 HPRT* GATGATGAACCAGGTTATGACC CTACAGTCATAGGAATGGATC 0.311 hypoxanthine-guanine phosphoribosyltransferase 
 URB010 CTGGAGCATAACACGATCAGGAC CCACTCCTTCTTTCAGCA 0.806   
 XBM19 TGGCAACCCATTCCAGTATT GCAAACTATCTCACCTCCTTCA 0.28   
  • Back to the chromosome panel
  • Data from http://www.projects.roslin.ac.uk/comrad/introduction.html
  • Contact: Dr John Williams
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