| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
8.4-8.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs108993037 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 6.89E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cows in Canada. |
| Breeds associated:
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| Design: | Animals were genotyped using the Bovine Geneseek Genomic Profiler 26K Beadchip, with data imputed to HD, and analyzed for serum IGF-1 level. A total of 636,471 SNPs were used for analysis. |
| Analysis: | A mixed linear model based on the leave-one-chromosome out method was used for whole-genome association analysis. |
| Software: | PLINK, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Gobikrushanth M, Purfield D C, Colazo M G, Wang Z, Butler S T, Ambrose D J |
| Affiliation: | Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada, T6G 2P5; Teagasc, Animal & Grassland Research and Innovation Centre, Moorepark, Fermoy, Co. Cork, Ireland, P61 C996 |
| Title: | The relationship between serum insulin-like growth factor-1 (IGF-1) concentration and reproductive performance, and genome-wide associations for serum IGF-1 in Holstein cows |
| Journal: | Journal of dairy science, 2018, 101(10): 9154-9167 |
| Links: |
PubMed | Abstract | List all data
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