Release 56
(Apr 24, 2025)

QTL 20084 Description:

 Trait Information
Trait name: Bovine spongiform encephalopathy susceptibility Vertebrate Trait Ontology: n/a
Reported name: Bovine spongiform encephalopathy Product Trait Ontology: n/a
Symbol: BSE Clinical Measurement Ontology: Disease process measurement
 QTL Map Information
Chromosome:13
QTL Peak Location:49 (cM)
QTL Span:25.97-26.17 (cM)
20.6-20.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.0024
Dominance effect:n/a
Additive effect:n/a
Associated Gene:PRNP (prion protein)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Polish Holstein-Friesian cattle.
     Breeds associated:
    Design:Animals were genotyped for two polymorphisms in PRNP and analyzed for BSE infection status.
    Analysis:Fisher's exact test was used.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:Gurgul A, Czarnik U, Larska M, Polak MP, Strychalski J, Słota E
    Affiliation:Laboratory of Genomics, National Research Institute of Animal Production, Krakowska 1, 32-083, Balice n. Krakow, Poland.
    Title:Polymorphism of the prion protein gene (PRNP) in Polish cattle affected by classical bovine spongiform encephalopathy.
    Journal:Molecular biology reports, 2012, 39 (5): 5211-7
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:intron 1 12-bp indel
    User inputs on reference #22170597
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  • Cite this Data:

    Animal QTLdb: QTL20084 was published in 2012, and was curated into QTLdb on 2013-04-02. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:20084

     

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