| QTL Map Information |
|---|
| Chromosome: | 3 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs42350603 |
| Peak: | |
| Lower, "Significant": | rs43351851 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Suggestive |
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VARIANCE | 0.415% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cows. |
| Breeds associated:
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| Design: | Animals had genotype data for 79,060 SNP markers. GWAS was performed for postpartum blood calcium level. A total of 75,186 SNPs were used for analysis. |
| Analysis: | Candidate genomic regions association with blood calcium concentration were identified based on the amount of genetic variance explained by 1.0 Mb windows of adjacent SNPs. |
| Software: | BLUPF90, POSTGSF90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Cavani L, Poindexter MB, Nelson CD, Santos JEP, Peñagaricano F |
| Affiliation: | Department of Animal and Dairy Sciences, University of Wisconsin, Madison 53706 |
| Title: | Gene mapping, gene-set analysis, and genomic prediction of postpartum blood calcium in Holstein cows |
| Journal: | Journal of dairy science, 2021, S0022-0302(21)00983-8 |
| Links: |
PubMed | Abstract | List all data
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