| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 97.47 (cM) |
| QTL Span: | 97.47-97.47 (cM)
83.8-83.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41588957 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.736 | | P_values | <0.001 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #24071
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were German Holstein cows. |
| Breeds associated:
|
| Design: | Animals were genotyped for 10 SNPs on 6 chromosomes and analyzed for milk somatic cell score. SNPs were previously found to be significant for SCS DYD in a GWAS study of bulls (unpublished). |
| Analysis: | A mixed model was used. |
| Software: | SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Abdel-Shafy H, Bortfeldt RH, Reissmann M, Brockmann GA |
| Affiliation: | Breeding Biology and Molecular Genetics, Department for Crop and Animal Sciences, Humboldt-Universität zu Berlin, Invalidenstraße 42, 10115 Berlin, Germany |
| Title: | Short communication: Validation of somatic cell score-associated loci identified in a genome-wide association study in German Holstein cattle |
| Journal: | Journal of dairy science, 2014, 97(4)2481-6 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #24485673
Add your comments
Note similar findings
Note contradictions
|
