| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs137791540 |
| Peak: | |
| Lower, "Significant": | rs135125978 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
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VARIANCE | 1.29% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
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| Animals: | Animals were Italian Holstein bulls. |
| Breeds associated:
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| Design: | Animals were genotyped using either the Illumina BovineSNP50 BeadChip (data imputed to HD) or BovineHD BeadChip, and GWAS were performed for sperm total and progressive motility. A total of 412,737 SNPs were used for analysis. |
| Analysis: | Genomic BLUP and a repeatability single-trait animal model were used. |
| Software: | Beagle 4.1 & 5.2, Plink 1.9, BLUPF90, GALLO v0.99 in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ramirez-Diaz J, Cenadelli S, Bornaghi V, Bongioni G, Montedoro S M, Achilli A, Capelli C, Rincon J C, Milanesi M, Passamonti M M, Colli L, Barbato M, Williams J L, Marsan P Ajmone |
| Affiliation: | Department of Animal Sciences, Food and Nutrition (DIANA), Università Cattolica del Sacro Cuore, Piacenza, Italy 29122; Institute of Agricultural Biology and Biotechnology (IBBA), Consiglio Nazionale di Ricerca, Milano, Italy |
| Title: | Identification of genomic regions associated with total and progressive sperm motility in Italian Holstein bulls |
| Journal: | Journal of dairy science, 2022, S0022-0302(22)00660-9 |
| Links: |
PubMed | Abstract | List all data
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