| QTL Map Information |
|---|
| Chromosome: | 12 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs5343953925 |
| Peak: | |
| Lower, "Significant": | rs473904091 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | - |
| Test base: | - |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.837% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein-Friesian cattle. |
| Breeds associated:
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| Design: | Cattle were genotyped using several genotyping panels, with data imputed to a common 50K panel then to HD and finally whole-genome level. GWAS were performed for twinning rate, age at first calving, cow survival and calving interval. |
| Analysis: | Association analysis was performed using an additive model and the ssGWAS method. |
| Software: | Beagle v5.4, BLUPF90, qvalue in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Kirkpatrick BW, Berry DP |
| Affiliation: | Department of Animal and Dairy Sciences, University of Wisconsin-Madison, 53706, USA |
| Title: | A genomic analysis of twinning rate and its relationship with other reproductive traits in Holstein-Friesian cattle |
| Journal: | Journal of dairy science, 2025, 108(2):1686-1698 |
| Links: |
PubMed | Abstract | List all data
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