| QTL Map Information |
|---|
| Chromosome: | X |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
88.6-88.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs379594586 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | 8.86E-3 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were North American Holstein cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using 60K SNPs, with data imputed to HD then to whole-genome sequence. GWAS was performed for A total of 7,994,662 SNPs were used for analysis. |
| Analysis: | Single-step GWAS was performed using two datasets. |
| Software: | BLUPF90, R v4.0.1, PLINK v1.9, FImpute v3 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Lett Beth M, Kirkpatrick Brian W |
| Affiliation: | Department of Animal and Dairy Sciences, University of Wisconsin-Madison, Madison 53706 |
| Title: | Identifying genetic variants and pathways influencing daughter averages for twinning in North American Holstein cattle and evaluating the potential for genomic selection |
| Journal: | Journal of dairy science, 2022, 105(7): 5972-5984 |
| Links: |
PubMed | Abstract | List all data
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