| QTL Map Information |
|---|
| Chromosome: | 29 |
| QTL Peak Location: | 62.79 (cM) |
| QTL Span: | 62.79-62.79 (cM)
43.4-43.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs17871051 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.01 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CAPN1 (calpain 1, (mu/I) large subunit) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Hanwoo cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for three SNPs in CAST and four in CAPN1 and analyzed for meat quality traits. |
| Analysis: | A linear mixed regression model was used. |
| Software: | ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Lee SH, Kim SC, Chai HH, Cho SH, Kim HC, Lim D, Choi BH, Dang CG, Sharma A, Gondro C, Yang BS, Hong SK |
| Affiliation: | Department of Life and Environment, National Institute of Animal Science, RDA, Suwon, Republic of Korea |
| Title: | Mutations in calpastatin and μ-calpain are associated with meat tenderness, flavor and juiciness in Hanwoo (Korean cattle): molecular modeling of the effects of substitutions in the calpastatin/μ-calpain complex |
| Journal: | Meat science, 2014, 96(4): 1501-8 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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