Release 56
(Apr 24, 2025)

QTL 37315 Description:

 Trait Information
Trait name: Coat color Vertebrate Trait Ontology: Coat/hair pigmentation trait
Reported name: Coat color Product Trait Ontology: n/a
Symbol: CCOLOR Clinical Measurement Ontology: Coat/hair color measurement
 QTL Map Information
Chromosome:5
QTL Peak Location:17.34 (cM)
QTL Span:17.34-17.34 (cM)
15.0-15.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs29019174
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
P_values1.83E-6
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Fleckvieh cattle.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for coat color saturation. A total of 35,272 SNPs were used for analysis.
    Analysis:Single-marker regression was used.
    Software:R software
    Notes: 
    Links:Edit

     Reference
    Authors:M�sz�ros G1, Petautschnig E, Schwarzenbacher H, S�lkner J
    Affiliation:Division of Livestock Sciences, University of Natural Resources and Life Sciences, A-1180, Vienna, Austria
    Title:Genomic regions influencing coat color saturation and facial markings in Fleckvieh cattle
    Journal:Animal genetics, 2015, 46(1): 65-8
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:C* light intensity
    User inputs on reference #25515556
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  • Cite this Data:

    Animal QTLdb: QTL37315 was published in 2015, and was curated into QTLdb on 2015-03-20. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:37315

     

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