Release 56
(Apr 24, 2025)

QTL 9935 Description:

 Trait Information
Trait name: Coat color Vertebrate Trait Ontology: Coat/hair pigmentation trait
Reported name: Coat color Product Trait Ontology: n/a
Symbol: CCOLOR Clinical Measurement Ontology: Coat/hair color measurement
 QTL Map Information
Chromosome:5
QTL Peak Location:37.88 (cM)
QTL Span:71.76-74.85 (cM)
63.6-66.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":ETH10
Peak:
Lower, "Significant":DIK5248
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.001
Dominance effect:n/a
Additive effect:n/a
Associated Gene:PMEL (premelanosome protein)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were from a Charolais x Holstein cross.
     Breeds associated:
    Design:Animals were genotyped for microsatellite markers throughout the genome and analyzed for coat color traits.
    Analysis:A regression model was used for QTL mapping.
    Software:CRIMAP, GenStat, QTL Express
    Notes: 
    Links:Edit

     Reference
    Authors:Gutierrez-Gil, B; Wiener, P; Williams, J L
    Affiliation:Roslin Institute (Edinburgh), Roslin, Midlothian, Scotland, UK; beatriz.gutierrez@unileon.es
    Title:Genetic effects on coat colour in cattle: dilution of eumelanin and phaeomelanin pigments in an F2-Backcross Charolais x Holstein population.
    Journal:BMC genetics, 2007, 8: 56
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #17705851
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  • Cite this Data:

    Animal QTLdb: QTL9935 was published in 2007, and was curated into QTLdb on 2009-12-02. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:9935

     

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