Release 56
(Apr 24, 2025)

QTL 286277 Description:

 Trait Information
Trait name: Offspring number Vertebrate Trait Ontology: Offspring quantity
Trait details: average litter size Product Trait Ontology: n/a
Symbol: TNB Clinical Measurement Ontology: Number of offspring
 QTL Map Information
Chromosome:5
QTL Peak Location:n/a
QTL Span:n/a
116.1-116.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs644062850
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:Genome-wise
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Dazu Black goats.
     Breeds associated:
    n/a
    Design:Animals were subjected to whole-genome resequencing, and GWAS were performed for reproductive traits.
    Analysis:A mixed linear model was used for GWAS.
    Software:Beagle 5.0, GEMMA, QQ map in R
    Notes: 
    Links:Edit

     Reference
    Authors:Fang X, Gu B, Chen M, Sun R, Zhang J, Zhao L, Zhao Y
    Affiliation:College of Animal Science and Technology, Southwest University, Chongqing 400715, China
    Title:Genome-Wide Association Study of the Reproductive Traits of the Dazu Black Goat (Capra hircus) Using Whole-Genome Resequencing
    Journal:Genes, 2023, 14(10):1960.
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #37895309
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  • Cite this Data:

    Animal QTLdb: QTL286277 was published in 2023, and was curated into QTLdb on 2023-11-17. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:286277

     

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