| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
15.6-15.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs396994746 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.79E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Pura Raza Español (Andalusian) mares. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Affymetrix Axiom Equine 670K SNP Genotyping Array, and GWAS was performed for mare reproductive efficiency. A total of 158,974 SNPs were used for analysis. |
| Analysis: | A univariate linear mixed model was used. |
| Software: | PLINK v1.9, GEMMA, qqman and GWASTools in R |
| Notes: | |
| Reference |
|---|
| Authors: | Laseca N, Demyda-Peyrás S, Valera M, Ramón M, Escribano B, Perdomo-González DI, Molina A |
| Affiliation: | Departamento de Genética. Facultad de Veterinaria, Universidad de Córdoba, Campus de Rabanales, CN-IV km 396, 14071 Córdoba, España |
| Title: | A genome-wide association study of mare fertility in the Pura Raza Español horse |
| Journal: | Animal: an international journal of animal bioscience, 2022, 16(3): 100476 |
| Links: |
PubMed | Abstract | List all data
|
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