| QTL Map Information |
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| Chromosome: | 15 |
| QTL Peak Location: | 966.32 (cM) |
| QTL Span: | 943.18-989.47 (cM)
20.7-21.7 (Mbp) |
 |
Upper, "Suggestive": | rs69010645 |
| Upper, "Significant": | n/a |
| Peak: | rs69012115 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | rs69001431 |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Suggestive |
 |
VARIANCE | 0.211 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Shetland ponies and Icelandic horses. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina equine HD chip and analyzed for insect bite hypersensitivity. Following quality control, 46888 and 51453 SNPs were used for analysis in Shetland ponies and Icelandic horses, respectively. |
| Analysis: | The Bayesian variable selection method Bayes-C was used. |
| Software: | GenABEL in R, GenSel, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Schurink A, Wolc A, Ducro BJ, Frankena K, Garrick DJ, Dekkers JC, van Arendonk JA |
| Affiliation: | Animal Breeding and Genomics Centre, Wageningen University, P,O, Box 338, Wageningen, 6700 AH, the Netherlands. |
| Title: | Genome-wide association study of insect bite hypersensitivity in two horse populations in the Netherlands. |
| Journal: | Genetics, Selection, Evolution : GSE, 2012, 44: 31 |
| Links: |
PubMed | Abstract | List all data
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