| QTL Map Information |
|---|
| Chromosome: | Z |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
7.3-7.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs16751773 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #156557
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Birds were Qingyuan Partridge chickens. |
| Breeds associated:
n/a
|
| Design: | Birds were genotyped for 546 SNPs and analyzed for earlobe color. |
| Analysis: | A case-control association analysis was performed. |
| Software: | GATK, SAMtools, EIGENSOFT, PLINK, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Luo W, Xu J, Li Z, Xu H, Lin S, Wang J, Ouyang H, Nie Q, Zhang X |
| Affiliation: | aDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science, South China Agricultural University, Guangzhou |
| Title: | Genome-Wide Association Study and Transcriptome Analysis Provide New Insights into the White/Red Earlobe Color Formation in Chicken |
| Journal: | Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology, 2018, 46(5): 1768-1778 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #29705805
Add your comments
Note similar findings
Note contradictions
|
