| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | n/a
169.6-169.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs13972304 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 4.57E-7 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were from an F(2) population derived from a reciprocal cross between White Recessive Rock and Xinghua chickens. |
| Breeds associated:
n/a
|
| Design: | Birds were genotyped for 47,678 SNPs using the Illumina 60K SNP array and analyzed for association with growth traits. |
| Analysis: | Association tests were implemented using the generalized least square version of epiSNP that considered sib correlation within each family. |
| Software: | epiSNP, Minitab 15 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Xie L, Luo C, Zhang C, Zhang R, Tang J, Nie Q, Ma L, Hu X, Li N, Da Y, Zhang X |
| Affiliation: | Guangdong Provincial Key Lab of Agro-Animal Genomics and Molecular Breeding, Guangzhou, Guangdong, China |
| Title: | Genome-wide association study identified a narrow chromosome 1 region associated with chicken growth traits |
| Journal: | PLoS One, 2012, 7(2):e30910 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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