| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
61.0-62.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs316236416 |
| Peak: | rs13619262 |
| Lower, "Significant": | rs313095836 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 0.52% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #193628
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Birds were from the Embrapa F2 Chicken Resource Population, which results from crosses between two closed parental lines, a broiler line and a layer line. |
| Breeds associated:
n/a
|
| Design: | Birds were genotyped using the Affymetrix Axiom 600K Chicken Genotyping Array and analyzed for body weight and fatness traits. A total of 371,786 SNPs were used for analysis. |
| Analysis: | GWAS was performed using a Bayesian approach |
| Software: | GenSel |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Moreira GCM, Boschiero C, Cesar ASM, Reecy JM, Godoy TF, Pértille F, Ledur MC, Moura ASAMT, Garrick DJ, Coutinho LL |
| Affiliation: | Department of Animal Science, University of São Paulo, Piracicaba, SP, Brazil |
| Title: | Integration of genome wide association studies and whole genome sequencing provides novel insights into fat deposition in chicken |
| Journal: | Scientific reports, 2019, 8(1): 16222 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #30385857
Add your comments
Note similar findings
Note contradictions
|
