| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | n/a
58.8-58.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs14188947 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
LOD_score | 2.63 | | P_values | 0.020 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were from a cross between UCD-200 (model for systemic sclerosis) and red jungle fowl chickens. |
| Breeds associated:
|
| Design: | Birds were genotyped for 326 SNPs and analyzed for incidence of avian systemic sclerosis. |
| Analysis: | Logistic regression and variance component methods were used. |
| Software: | R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ek W, Sahlqvist AS, Crooks L, Sgonc R, Dietrich H, Wick G, Ekwall O, Andersson L, Carlborg Ö, Kämpe O, Kerje S |
| Affiliation: | Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden |
| Title: | Mapping QTL affecting a systemic sclerosis-like disorder in a cross between UCD-200 and red jungle fowl chickens. |
| Journal: | Developmental and comparative immunology, 2012, 38(2):352-9 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Late SSc |
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