| QTL Map Information |
|---|
| Chromosome: | 24 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
4.1-4.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs317350539 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Birds were from a chicken dwarf line derived from hybrids bred between Rhode Island Red (a black tail breed) and dwarf layers (a white tail breed). |
| Breeds associated:
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| Design: | Birds were genotyped using the 600K Affymetrix Axiom Chicken Genotyping Array and GWAS was performed for tail feather color. A total of 479,579 SNPs were used for analysis. |
| Analysis: | A mixed model was used for GWAS. |
| Software: | GEMMA v0.94.1, PLINK v1.09 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Nie C, Qu L, Li X, Jiang Z, Wang K, Li H, Wang H, Qu C, Qu L, Ning Z |
| Affiliation: | State Key Laboratory of Animal Nutrition, Department of Animal Genetics and Breeding, National Engineering Laboratory for Animal Breeding, College of Animal Science and Technology, China Agricultural University, Beijing, China |
| Title: | Genomic Regions Related to White/Black Tail Feather Color in Dwarf Chickens Identified Using a Genome-Wide Association Study |
| Journal: | Frontiers in genetics, 2021, 12: 566047 |
| Links: |
PubMed | Abstract | List all data
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