| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 168.81 (cM) |
| QTL Span: | 168.79-168.83 (cM)
133.3-133.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs424772115 |
| Peak: | |
| Lower, "Significant": | rs404319774 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.0128 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Sishui Fur sheep. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina Ovine Infinium HD SNP BeadChip and analyzed for SNP association with polycerate phenotype. A total of 491,507 SNPs were used for analysis. |
| Analysis: | A case-control model and a chi-square test for haplotype-phenotype association were used. |
| Software: | GENEPOP, PLINK, Haploview, GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ren X, Yang GL, Peng WF, Zhao YX, Zhang M, Chen ZH, Wu FA, Kantanen J, Shen M, Li MH |
| Affiliation: | CAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences (CAS), Beijing 100101, China |
| Title: | A genome-wide association study identifies a genomic region for the polycerate phenotype in sheep (Ovis aries) |
| Journal: | Scientific reports, 2016, 6: 21111 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | polycerate |
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