| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 50.27 (cM) |
| QTL Span: | 49.61-50.93 (cM)
37.2-38.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs409711193 |
| Peak: | |
| Lower, "Significant": | rs429512814 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
LikelihoodR | 24.6 | | FDR | 0.002 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Sheep were from a large, multi-breed population (70% Merino genes) from the information nucleus flock of the Australian Sheep Cooperative Research Centre. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina OvineSNP50 BeadChip, with data imputed to the 600K Ovine Infinium HD BeadChip, and analyzed for worm egg count in feces. |
| Analysis: | Single-SNP regression analysis was performed using a linear mixed model. |
| Software: | Minimac 3, GEMMA, FImpute, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Al Kalaldeh M, Gibson J, Lee SH, Gondro C, van der Werf JHJ |
| Affiliation: | School of Environmental and Rural Science, University of New England, Armidale, NSW, 2351, Australia |
| Title: | Detection of genomic regions underlying resistance to gastrointestinal parasites in Australian sheep |
| Journal: | Genetics, Selection, Evolution : GSE, 2019, 51(1): 37 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | 200-SNP window |
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