| QTL Map Information |
|---|
| Chromosome: | 12 |
| QTL Peak Location: | 15.58 (cM) |
| QTL Span: | 15.58-15.58 (cM)
11.6-11.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs424267512 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 3.03E-04 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #193388
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Swiss White Alpine sheep. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina OvineHD BeadChip and analyzed for occurrence of entropion. A total of 405,055 SNPs were used for analysis. |
| Analysis: | GWAS was performed using a linear mixed model while adjusting for population stratification. |
| Software: | PLINK, GEMMA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Hirter N, Letko A, Häfliger IM, Becker D, Greber D, Drögemüller C |
| Affiliation: | Vetsuisse Faculty, Institute of Genetics, University of Bern, 3001, Bern, Switzerland |
| Title: | A genome-wide significant association on chromosome 15 for congenital entropion in Swiss White Alpine sheep |
| Journal: | Animal Genetics, 2020, 51:2 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #31945208
Add your comments
Note similar findings
Note contradictions
|
