| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 303.73 (cM) |
| QTL Span: | 303.73-303.73 (cM)
239.9-239.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs414806237 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.03 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SLC30A2 (solute carrier family 30 member 2) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were male Scottish Blackface lambs. |
| Breeds associated:
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| Design: | Transcriptome analysis was performed to compare lambs resistant and susceptible to gastrointestinal nematode infection. Association analysis was then carried out for 24 SNPs within 11 differentially expressed genes. |
| Analysis: | Mixed models were used. |
| Software: | ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | McRae KM, Good B, Hanrahan JP, McCabe MS, Cormican P, Sweeney T, O'Connell MJ, Keane OM |
| Affiliation: | Animal & Bioscience Department, Teagasc, Grange, Dunsany, Co. Meath, Ireland |
| Title: | Transcriptional profiling of the ovine abomasal lymph node reveals a role for timing of the immune response in gastrointestinal nematode resistance |
| Journal: | Veterinary parasitology, 2016, 224: 96-108 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Species other than Nematodirus; FEC2 |
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