| QTL Map Information |
|---|
| Chromosome: | 26 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs430324249 |
| Peak: | |
| Lower, "Significant": | rs422565947 |
| Lower, "Suggestive": | n/a |
| Marker type: | Haplotype |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
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P_values | 1.37E-06 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Alpine Merino sheep. |
| Breeds associated:
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| Design: | Animals were genotyped using custom Affymetrix HD 630K arrays, and GWAS was performed for erythrocyte traits using both SNPs and haplotypes. A total of 439,398 autosomal SNPs and 89,676 haplotype blocks were used for analysis. |
| Analysis: | Regression analysis based on the generalized linear model was used. |
| Software: | PLINK v1.9b4, TASSEL 5.2.43 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhu S, Guo T, Zhao H, Qiao G, Han M, Liu J, Yuan C, Wang T, Li F, Yue Y, Yang B |
| Affiliation: | Animal Science Department, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, Lanzhou, China |
| Title: | Genome-Wide Association Study Using Individual Single-Nucleotide Polymorphisms and Haplotypes for Erythrocyte Traits in Alpine Merino Sheep |
| Journal: | Frontiers in Genetics, 2020, 11: 848 |
| Links: |
PubMed | Abstract | List all data
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