| QTL Map Information |
|---|
| Chromosome: | 11 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
32.3-32.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs410744616 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 4.41E-4 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #259457
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Morada Nova sheep. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina OvineSNP50v3 BeadChip, and a case-control GWAS was performed comparing groups resistant or susceptible to Haemonchus contortus infection. A total of 47,782 SNPs were used for analysis. |
| Analysis: | Efficient mixed model association expedited (EMMAX) was used. |
| Software: | PLINK, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Niciura SCM, Benavides MV, Okino CH, Ibelli AMG, Minho AP, Esteves SN, Chagas ACS |
| Affiliation: | Embrapa Pecuária Sudeste, São Carlos 13560-970, SP, Brazil |
| Title: | Genome-Wide Association Study for Haemonchus contortus Resistance in Morada Nova Sheep |
| Journal: | Pathogens (Basel, Switzerland), 2022, 11(8):939 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #36015059
Add your comments
Note similar findings
Note contradictions
|
