| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 114.58 (cM) |
| QTL Span: | 107.59-121.57 (cM)
80.8-91.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs426828157 |
| Peak: | |
| Lower, "Significant": | rs405863388 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from a commercial population of Spanish Churra dairy sheep. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina OvineSNP50 BeadChip and analyzed for traits related to gastrointestinal nematode resistance. A total of 43,613 SNPs were used for analysis. |
| Analysis: | Genome scans based on a classical linkage analysis and a combined linkage disequilibrium linkage analysis (LDLA) were performed. A GWAS was carried out using a linear mixed model. |
| Software: | QTLMap, DMU, R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Atlija M, Arranz JJ, Martinez-Valladares M, Gutiérrez-Gil B |
| Affiliation: | Departamento de Producción Animal, Facultad de Veterinaria, Universidad de León, Campus de Vegazana s/n, León, 24071, Spain |
| Title: | Detection and replication of QTL underlying resistance to gastrointestinal nematodes in adult sheep using the ovine 50K SNP array |
| Journal: | Genet Sel Evol, 2016, 48(1):4 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Yield deviations; linkage analysis |
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