Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 19667 Description:

 Trait Information
Trait name: Bacterial coldwater disease survival rate Vertebrate Trait Ontology: Response to bacterial infection trait
Reported name: Bacterial coldwater disease survival rate Product Trait Ontology: n/a
Symbol: BCDSR Clinical Measurement Ontology: Disease process measurement
 QTL Map Information
Chromosome:3
QTL Peak Location:n/a
QTL Span:44.1-74.3 (cM)
18.7-31.5 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":OMM1016B
Peak:
Lower, "Significant":OMM5121
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:Chromosome-wise
Threshold significance level:Suggestive
LikelihoodR4.84
F_Stat5.00
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Two generation resource family from High and Low Spleen index parents.
     Breeds associated:
    n/a
    Design:Genome wide scan with 314 marker at 10 cM interval on 196 full-sib progeny.
    Analysis:half-sib (HS) regression interval mapping
    Software:QTL Express
    Notes: 
    Links:Edit

     Reference
    Authors:Wiens GD, Vallejo RL, Leeds TD, Palti Y, Hadidi S, Liu S, Evenhuis JP, Welch TJ, Rexroad CE 3rd
    Affiliation:NCCCWA-ARS-USDA
    Title:Assessment of Genetic Correlation between Bacterial Cold Water Disease Resistance and Spleen Index in a Domesticated Population of Rainbow Trout: Identification of QTL on Chromosome Omy19
    Journal:PLoS One, 2013, 8(10):e75749
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #24130739
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  • Cite this Data:

    Animal QTLdb: QTL19667 was published in 2013, and was curated into QTLdb on 2013-02-19. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:19667

     

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