| QTL Map Information |
|---|
| Chromosome: | 18 |
| QTL Peak Location: | 62.03 (cM) |
| QTL Span: | 61.89-62.16 (cM)
42.4-42.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs342293575 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.0067 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | TAS2R39 ( taste 2 receptor member 39) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #122014
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Italian Large White pigs. |
| Breeds associated:
|
| Design: | SNPs in nine TAS2R were analyzed for association with backfat thickness. |
| Analysis: | SNPs were tested for differences in allele frequency between two populations with extreme and divergent EBV for backfat thickness. |
| Software: | Variant Effect Predictor, SIFT |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ribani A, Bertolini F, Schiavo G, Scotti E, Utzeri V J, Dall'Olio S, Trevisi P, Bosi P, Fontanesi L |
| Affiliation: | Department of Agricultural and Food Sciences (DISTAL), Division of Animal Sciences, University of Bologna, Viale Fanin 46, 40127, Bologna, Italy |
| Title: | Next generation semiconductor based sequencing of bitter taste receptor genes in different pig populations and association analysis using a selective DNA pool-seq approach |
| Journal: | Animal genetics, 2017, 48(1):97-102 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #27435880
Add your comments
Note similar findings
Note contradictions
|
