| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 144.99 (cM) |
| QTL Span: | 144.99-144.99 (cM)
266.8-266.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs333213419 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Sutai pigs. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip, with data imputed to whole-genome sequence, and analyzed for lumbar vertebra number. After imputation, a total of 20,985,792 SNPs were used for analysis. |
| Analysis: | Mixed models were used. |
| Software: | PLINK, Beagle, Haploview, GEMMA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Yan G, Qiao R, Zhang F, Xin W, Xiao S, Huang T, Zhang Z, Huang L |
| Affiliation: | State Key Laboratory for Pig Genetic Improvement and Production Technology, Jiangxi Agricultural University, 330045, Nanchang, P.R. China |
| Title: | Imputation-Based Whole-Genome Sequence Association Study Rediscovered the Missing QTL for Lumbar Number in Sutai Pigs |
| Journal: | Scientific reports, 2017, 7(1): 615 |
| Links: |
PubMed | Abstract | List all data
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