Release 56
(Apr 24, 2025)

QTL 140277 Description:

 Trait Information
Trait name: Skatole, laboratory Vertebrate Trait Ontology: Muscle skatole amount
Reported name: (n/a) Product Trait Ontology: Meat skatole content
Symbol: SKAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:7
QTL Peak Location:0.00 (cM)
QTL Span:88.76-88.76 (cM)
73.3-73.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs431825241
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
LikelihoodR29.688
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #140277
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Duroc and Landrace boars.
     Breeds associated:
    Design:Animals were genotyped for 166 SNPs on SSC7 and analyzed for skatole level and other boar taint-related traits.
    Analysis:Mixed models were used.
    Software:Beagle, Haploview, ASReml
    Notes: 
    Links:Edit

     Reference
    Authors:van Son M, Kent MP, Grove H, Agarwal R, Hamland H, Lien S, Grindflek E
    Affiliation:Topigs Norsvin, Storhamargata 44, 2317, Hamar, Norway
    Title:Fine mapping of a QTL affecting levels of skatole on pig chromosome 7
    Journal:BMC genetics, 2017, 18(1): 85
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #29020941
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL140277 was published in 2017, and was curated into QTLdb on 2017-11-01. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:140277

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team