| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 81.08 (cM) |
| QTL Span: | 81.08-81.08 (cM)
168.2-168.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81296892 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 4.87E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Large White pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the GeneSeek PorcineSNP80 BeadChip and analyzed for reproductive traits. A total of 51, 443 SNPs were used for analysis. |
| Analysis: | Mixed models were used. |
| Software: | PLINK, GenABEL in R, GEMMA, GCTA, Beagle |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Wang Y, Ding X, Tan Z, Xing K, Yang T, Wang Y, Sun D, Wang C |
| Affiliation: | Key Laboratory of Animal Genetics and Breeding of Ministry of Agriculture, National Engineering Laboratory of Animal Breeding, College of Animal Science and Technology, China Agricultural University, Beijing, 100094, China |
| Title: | Genome-wide association study for reproductive traits in a Large White pig population |
| Journal: | Animal genetics, 2018, 49(2):127-131 |
| Links: |
PubMed | Abstract | List all data
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