| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 24.28 (cM) |
| QTL Span: | 24.28-24.28 (cM)
21.8-21.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81383186 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
LikelihoodR | 21.34 | | VARIANCE | 5.1% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were 970 Duroc boars from 70 paternal half-sib families. |
| Breeds associated:
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| Design: | Animals were genotyped for 182 SNPs in a previously identified QTL region and analyzed for fat androstenone and plasma estrone sulphate and 17β-estradiol levels. |
| Analysis: | Mixed models were used. |
| Software: | Beagle, Haploview, ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | van Son M, Agarwal R, Kent M P, Grove H, Grindflek E, Lien S |
| Affiliation: | Department of Animal and Aquacultural Sciences (IHA), Faculty of Life Sciences (BIOVIT), Centre for Integrative Genetics (CIGENE), Norwegian University of Life Sciences (NMBU), PO Box 5003, 1432, Ås, Norway |
| Title: | Exploiting whole genome sequence data to fine map and characterize candidate genes within a quantitative trait loci region affecting androstenone on porcine chromosome 5 |
| Journal: | Animal genetics, 2017, 48(6): 653-659 |
| Links: |
PubMed | Abstract | List all data
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