| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 37.21 (cM) |
| QTL Span: | 37.21-37.21 (cM)
3.6-3.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81334688 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.02 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
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|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from a composite Duroc sire line. |
| Breeds associated:
|
| Design: | Animals were genotyped using the PorcineSNP60 BeadChip and analyzed for skatole levels in fat. A total of 43,636 SNPs were used for analysis. |
| Analysis: | An adaptive permutation procedure was used to obtain empirical p-values. |
| Software: | PLINK, q-value/R, ASReml, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ramos AM, Duijvesteijn N, Knol EF, Merks JW, Bovenhuis H, Crooijmans RP, Groenen MA, Harlizius B |
| Affiliation: | Animal Breeding and Genomics Centre, Wageningen University, PO Box 338, 6700 AH, Wageningen, The Netherlands |
| Title: | The distal end of porcine chromosome 6p is involved in the regulation of skatole levels in boars |
| Journal: | BMC genetics, 2011, 12:35 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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