| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
111.5-111.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs321093586 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
Fst | 0.376 | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Casertana pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip v2 and analyzed for hairless vs. haired phenotype. A total of 36,533 SNPs were used for analysis. |
| Analysis: | The univariate mixed model of GEMMA was applied. |
| Software: | PLINK, GenABEL in R, Beagle |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Schiavo G, Bertolini F, Utzeri VJ, Ribani A, Geraci C, Santoro L, Óvilo C, Fernández AI, Gallo M, Fontanesi L |
| Affiliation: | Division of Animal Sciences, Department of Agricultural and Food Sciences, University of Bologna, Viale Fanin 46, 40127, Bologna, Italy |
| Title: | Taking advantage from phenotype variability in a local animal genetic resource: identification of genomic regions associated with the hairless phenotype in Casertana pigs |
| Journal: | Animal genetics, 2018, 49(4): 321-325 |
| Links: |
PubMed | Abstract | List all data
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