| QTL Map Information |
|---|
| Chromosome: | 17 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
16.4-16.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81465348 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 2.47E-4 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were commercial pigs in North America (unspecified breeds). |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the porcine GeneSeek Genomic Profiler 80K SNP chip and analyzed for periweaning failure to thrive syndrome. A total of 54,627 SNPs were used for analysis. |
| Analysis: | Logistic regression, single-SNP Fst, and window-based Fst analyses were used. |
| Software: | PLINK, GenABEL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Bertolini F, Yang T, Huang Y, Harding JCS, Plastow GS, Rothschild MF |
| Affiliation: | Department of Animal Science, Iowa State University, Ames, Iowa, USA |
| Title: | Genomic investigation of porcine periweaning failure to thrive syndrome (PFTS) |
| Journal: | Veterinary Record, 2018, 183(3): 95 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | logistic regression analysis |
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