| QTL Map Information |
|---|
| Chromosome: | 14 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
111.5-111.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs713641545 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | 0.003 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SCD (stearoyl-CoA desaturase (delta-9-desaturase)) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #169997
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were barrows from a commercial Duroc line. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for IMF and fatty acid composition. A total of 32,796 SNPs were used for GWAS. |
| Analysis: | Mixed models were used for association analysis. |
| Software: | PLINK, GEMMA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | González-Prendes R, Quintanilla R, Mármol-Sánchez E, Pena RN, Ballester M, Cardoso TF, Manunza A, Casellas J, Cánovas Á, Díaz I, Noguera JL, Castelló A, Mercadé A, Amills M |
| Affiliation: | Departament de Ciència Animal i dels Aliments, Facultat de Veterinària, Universitat Autònoma de Barcelona, 08193, Bellaterra, Spain |
| Title: | Comparing the mRNA expression profile and the genetic determinism of intramuscular fat traits in the porcine gluteus medius and longissimus dorsi muscles |
| Journal: | BMC genomics, 2019, 20(1): 170 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Longissimus dorsi |
User inputs on reference #30832586
Add your comments
Note similar findings
Note contradictions
|
