| QTL Map Information |
|---|
| Chromosome: | 4 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
99.8-99.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs340271997 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were White Duroc x Erhualian F2 pigs. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip, with data imputed to whole-genome sequence, and analyzed for Longissimus dorsi muscle fiber traits. |
| Analysis: | A linear mixed model was used for GWAS. |
| Software: | SHAPEIT2, IMPUTE2, GEMMA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Guo T, Gao J, Yang B, Yan G, Xiao S, Zhang Z, Huang L |
| Affiliation: | State Key Laboratory of Pig Genetic Improvement and Production Technology, Jiangxi Agricultural University, 330045, Nanchang, China |
| Title: | A whole genome sequence association study of muscle fiber traits in a White Duroc × Erhualian F2 resource population. |
| Journal: | Asian-Australasian journal of animal sciences, 2020, 33(5):704-711 |
| Links: |
PubMed | Abstract | List all data
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