| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 33.86 (cM) |
| QTL Span: | 33.86-33.86 (cM)
62.3-62.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81474332 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #23404
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Landrace, Yorkshire, and Songliao Black pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for T-cell population traits. A total of 40833 SNPs were used for analysis. |
| Analysis: | Regression analysis was performed based on a linear mixed model. |
| Software: | Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Lu X, Fu WX, Luo YR, Ding XD, Zhou JP, Liu Y, Liu JF, Zhang Q |
| Affiliation: | Key Laboratory Animal Genetics, Breeding and Reproduction, Ministry of Agriculture, College of Animal Science and Technology, National Engineering Laboratory for Animal Breeding, China Agricultural University, Beijing 100193, China |
| Title: | Genome-wide association study for T lymphocyte subpopulations in swine |
| Journal: | BMC genomics, 2012, 13: 488 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #22985182
Add your comments
Note similar findings
Note contradictions
|
