| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 121.99 (cM) |
| QTL Span: | 119.58-124.40 (cM)
146.0-151.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81336286 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 7.40E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
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|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were White Duroc x Erhualian or Sutai pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for blood lipid traits. A total of 39454 and 45322 SNPs were used for analyses in White Duroc x Erhualian and Sutai, respectively. |
| Analysis: | A mixed model based on the score test approach was used. |
| Software: | GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Chen C, Yang B, Zeng Z, Yang H, Liu C, Ren J, Huang L |
| Affiliation: | Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, Jiangxi Agricultural University, 330045, Nanchang, China |
| Title: | Genetic dissection of blood lipid traits by integrating genome-wide association study and gene expression profiling in a porcine model |
| Journal: | BMC genomics, 2013, 14: 848 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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