| QTL Map Information |
|---|
| Chromosome: | 8 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
75.7-75.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs345371115 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | <0.01 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | MND1 (meiotic nuclear divisions 1) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #239889
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Duroc x (Landrace x Yorkshire) hybrid commercial pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the GeneSeek Porcine 50K SNP chip, and GWAS was performed for body conformation traits. A total of |
| Analysis: | GWAS were performed using a linear mixed model and a FarmCPU-based method. |
| Software: | PLINK v1.07, GEMMA, GCTA, GAPIT v3.0, Haploview v4.2, GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhang H, Zhuang Z, Yang M, Ding R, Quan J, Zhou S, Gu T, Xu Z, Zheng E, Cai G, Yang J, Wu Z |
| Affiliation: | College of Animal Science and National Engineering Research Center for Breeding Swine Industry, South China Agricultural University, Guangdong, China |
| Title: | Genome-Wide Detection of Genetic Loci and Candidate Genes for Body Conformation Traits in Duroc × Landrace × Yorkshire Crossbred Pigs |
| Journal: | Frontiers in Genetics, 2021, 12: 664343 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Identified by GEMMA-based and FarmCPU-based GWAS |
User inputs on reference #34707635
Add your comments
Note similar findings
Note contradictions
|
