| QTL Map Information |
|---|
| Chromosome: | X |
| QTL Peak Location: | 388.92 (cM) |
| QTL Span: | 388.92-388.92 (cM)
94.2-94.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80957671 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.023 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | HTR2C (5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from an advanced intercross between Large White and Meishan. |
| Breeds associated:
|
| Design: | Animals were genotyped for SNPs in sixteen genes and analyzed for carcass and meat quality traits. |
| Analysis: | A pedigree-based association analysis was performed with the genome-wide rapid association using mixed model and regression approach and the genomic control method. |
| Software: | GenABEL in R, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Terenina E, Babigumira B M, Le Mignon G, Bazovkina D, Rousseau S, Salin F, Bendixen C, Mormede P |
| Affiliation: | INRA, UMR444, Laboratory for Cellular Genetics, Castanet-Tolosan, France |
| Title: | Association study of molecular polymorphisms in candidate genes related to stress responses with production and meat quality traits in pigs |
| Journal: | Domestic animal endocrinology, 2013, 44(2): 81-97 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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