| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 124.11 (cM) |
| QTL Span: | 124.11-124.11 (cM)
96.7-96.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81265875 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
F_Stat | 115.40 | | P_values | 5.62E-22 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | NUMB (numb homolog (Drosophila)) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were White Duroc x Erhualian, Erhualian x Tongcheng, Chinese Sutai, and Duroc x Landrace x Large White pigs. |
| Breeds associated:
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| Design: | Animals were genotyped using the PorcineSNP60 BeadChip and analyzed for thoracic vertebra number. |
| Analysis: | A mixed model-based single-locus regression analysis was performed. |
| Software: | GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Fan Y, Xing Y, Zhang Z, Ai H, Ouyang Z, Ouyang J, Yang M, Li P, Chen Y, Gao J, Li L, Huang L, Ren J |
| Affiliation: | Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, Jiangxi Agricultural University, Nanchang, People's Republic of China. |
| Title: | A further look at porcine chromosome 7 reveals VRTN variants associated with vertebral number in Chinese and Western pigs. |
| Journal: | PloS one, 2013, 8(4): e62534 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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