| QTL Map Information |
|---|
| Chromosome: | 18 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs81322798 |
| Peak: | |
| Lower, "Significant": | rs81471521 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | - |
| Threshold significance level: | Significant |
 |
VARIANCE | 2.170% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
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| Animals: | Animals were French Large White pigs. |
| Breeds associated:
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| Design: | Sows were genotyped using the GGP 50K SNP BeadChip, and both a single-locus GWAS and a single-step GWAS were performed for litter traits. A total of 42,726 SNPs were used for analysis. |
| Analysis: | A mixed linear model and REML were used. |
| Software: | PLINK v1.90, BLUPF90, rMVP in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Chen J, Wu Z, Chen R, Huang Z, Han X, Qiao R, Wang K, Yang F, Li XJ, Li XL |
| Affiliation: | College of Animal Science and Technology, Henan Agricultural University, Zhengzhou 450046, China |
| Title: | Identification of Genomic Regions and Candidate Genes for Litter Traits in French Large White Pigs Using Genome-Wide Association Studies |
| Journal: | Animals : an open access journal from MDPI, 2022, 12(12):1584 |
| Links: |
PubMed | Abstract | List all data
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