| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
18.1-18.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs339190393 |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | - |
| Threshold significance level: | Significant |
 |
VARIANCE | 14.53% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Yunong black pigs. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the KPS Porcine Breeding Chip 50K, and GWAS were performed for reproduction traits. A total of 42,059 SNPs were used for analysis. |
| Analysis: | Single-locus GWAS was performed using a mixed linear model. |
| Software: | PLINK v1.9, GCTA v1.93.2, rMVP in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Li M, Li X, Liu C, Han J, Han X, Wang K, Qiao R, Yang F, Li XL, Li XJ |
| Affiliation: | College of Animal Science and Technology, Henan Agricultural University, Henan, Zhengzhou, China |
| Title: | Genome-wide association study reveals the candidate genes for reproduction traits in Yunong black pigs |
| Journal: | Animal Genetics, 2023, 54(3):403-407 |
| Links: |
PubMed | Abstract | List all data
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