| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 30.01 (cM) |
| QTL Span: | 30.01-30.01 (cM)
22.8-22.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80916078 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 1.47E-06 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese Sutai pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for hematological traits. A total of 39786 SNPs were used for analyses. |
| Analysis: | Single marker GWAS and haplotype analysis were performed using linear mixed models. |
| Software: | R, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhang F, Zhang Z, Yan X, Chen H, Zhang W, Hong Y, Huang L |
| Affiliation: | Key Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, Jiangxi Agricultural University, 330045 Nanchang, China |
| Title: | Genome-wide association studies for hematological traits in Chinese Sutai pigs |
| Journal: | BMC genetics, 2014, 15: 41 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Haplotype analysis |
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