| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
14.9-14.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81382621 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 9.7E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were purebred Yorkshire sows. |
| Breeds associated:
|
| Design: | Pigs were genotyped using the Illumina PorcineSNP50 BeadChip and GWAS were performed for litter traits. A total of 41,314 SNPs were used for analysis. |
| Analysis: | GWAS was performed using a repeatability model. |
| Software: | DMU, SAS, PLINK v1.9, Beagle5.2, GMAT, gcta |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhang Y, Lai J, Wang X, Li M, Zhang Y, Ji C, Chen Q, Lu S |
| Affiliation: | Faculty of Animal Science and Technology, Yunnan Agricultural University, Kunming, 650201, China |
| Title: | Genome-wide single nucleotide polymorphism (SNP) data reveal potential candidate genes for litter traits in a Yorkshire pig population |
| Journal: | Archives animal breeding, 2023, 66: 357-368 |
| Links: |
PubMed | Abstract | List all data
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