| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 42.42 (cM) |
| QTL Span: | 42.42-42.42 (cM)
30.4-30.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80936157 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
VARIANCE | 48.13 | | P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | NUDT3 (nudix (nucleoside diphosphate linked moiety X)-type motif 3) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Large White x Minzhu pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for limb bone lengths. |
| Analysis: | The genome-wide rapid association approach using mixed model and regression was used. |
| Software: | DMU, GenABEL in R, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhang LC, Li N, Liu X, Liang J, Yan H, Zhao KB, Pu L, Shi HB, Zhang YB, Wang LG, Wang LX |
| Affiliation: | Key Laboratory of Farm Animal Genetic Resources and Germplasm Innovation of Ministry of Agriculture, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China |
| Title: | A genome-wide association study of limb bone length using a Large White x Minzhu intercross population |
| Journal: | Genetics, Selection, Evolution : GSE, 2014, 46(1): 56 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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