| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | 114.55 (cM) |
| QTL Span: | 114.55-114.55 (cM)
182.7-182.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81293743 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 3.22E-02 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Pietrain x (German Landrace x Large White) and German Landrace pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for meat quality traits. A total of 47,524 (Pi x (GL x LW)) or 48,977 (GL) SNPs were used for analysis. SNPs identified as significant by GWAS were used in eQTL analysis. |
| Analysis: | Mixed-model analysis of variance was performed. |
| Software: | JMP Genomics |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ponsuksili S, Murani E, Trakooljul N, Schwerin M, Wimmers K |
| Affiliation: | 2. Research Unit 'Molecular Biology', Leibniz Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, D-18196 Dummerstorf, Germany |
| Title: | Discovery of candidate genes for muscle traits based on GWAS supported by eQTL-analysis |
| Journal: | International journal of biological sciences, 2014, 10(3): 327-37 |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
|---|
| Comments: | Minolta |
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