| QTL Map Information |
|---|
| Chromosome: | 12 |
| QTL Peak Location: | 127.38 (cM) |
| QTL Span: | 127.38-127.38 (cM)
58.2-58.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81337891 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from a three-generation resource population obtained by crossing Large White boars with Minzhu sows. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for meat quality traits. The final data set contained 48,238 SNPs. |
| Analysis: | Analysis was performed via Genome-wide Rapid Association using the Mixed Model and Regression-Genomic Control (GRAMMAR-GC) approach. |
| Software: | GenABEL in R, Haploview, Haplo.Stats |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Luo W, Cheng D, Chen S, Wang L, Li Y, Ma X, Song X, Liu X, Li W, Liang J, Yan H, Zhao K, Wang C, Wang L, Zhang L |
| Affiliation: | 1. Key Laboratory of Farm Animal Genetic Resources and Germplasm Innovation of Ministry of Agriculture of China, In-stitute of Animal Science, Chinese Academy of Agricultural Sciences, 100193 Beijing, China.2. College of Animal Scie |
| Title: | Genome-Wide Association Analysis of Meat Quality Traits in a Porcine Large White × Minzhu Intercross Population |
| Journal: | Int J Biol Sci, 2012, 8(4):580-595 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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